STRINGSTRING
R2601_13920 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13920" - Uncharacterized protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13920Uncharacterized protein (134 aa)    
Predicted Functional Partners:
pyrB
Aspartate transcarbamylase (316 aa)
              0.866
R2601_13915
Uncharacterized protein (182 aa)
              0.863
plsY
Lysophosphatidic acid synthase ; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (205 aa)
              0.635
R2601_13925
Dihydroorotase (427 aa)
              0.635
R2601_13905
Uracil-DNA glycosylase (264 aa)
              0.535
R2601_13900
Uncharacterized protein (177 aa)
              0.471
R2601_13940
O-6-methylguanine-DNA-alkyltransferase ; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction- the enzyme is irreversibly inactivated (169 aa)
              0.462
R2601_13935
Transcriptional regulatory protein (186 aa)
              0.462
R2601_13895
Molybdenum cofactor biosynthesis protein B ; May be involved in the biosynthesis of molybdopterin (180 aa)
              0.458
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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