STRINGSTRING
R2601_13925 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13925" - Dihydroorotase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_13925Dihydroorotase (427 aa)    
Predicted Functional Partners:
pyrB
Aspartate transcarbamylase (316 aa)
  0.999
R2601_12675
Dihydroorotate dehydrogenase (quinone) ; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (352 aa)
 
  0.998
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
  0.991
R2601_14240
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) (1110 aa)
  0.986
carA
Carbamoyl-phosphate synthetase glutamine chain (379 aa)
  0.984
plsY
Lysophosphatidic acid synthase ; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (205 aa)
 
          0.938
R2601_12975
Glutamate synthase, small subunit (478 aa)
 
  0.929
pyrF
OMP decarboxylase ; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (235 aa)
 
 
  0.929
R2601_11836
Pyridine nucleotide-disulphide oxidoreductase family protein (426 aa)
   
  0.918
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
 
  0.908
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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