STRINGSTRING
R2601_13935 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_13935" - Transcriptional regulatory protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
R2601_13935Transcriptional regulatory protein (186 aa)    
Predicted Functional Partners:
R2601_13940
O-6-methylguanine-DNA-alkyltransferase ; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction- the enzyme is irreversibly inactivated (169 aa)
 
  0.995
R2601_23795
Phospholipase/carboxylesterase family protein (430 aa)
   
 
  0.729
plsY
Lysophosphatidic acid synthase ; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (205 aa)
              0.632
R2601_13925
Dihydroorotase (427 aa)
              0.632
R2601_15472
ADA regulatory protein (278 aa)
 
 
  0.615
R2601_13945
Uncharacterized protein (48 aa)
              0.606
R2601_14080
Alkylated DNA repair protein, putative (201 aa)
   
   
  0.532
rpoD
Sigma-70 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (661 aa)
       
      0.511
R2601_09947
RNA polymerase sigma factor (292 aa)
       
      0.511
rpoH
RNA polymerase sigma-32 factor (298 aa)
       
      0.511
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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