STRINGSTRING
R2601_14045 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14045" - Copper-translocating P-type ATPase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14045Copper-translocating P-type ATPase (828 aa)    
Predicted Functional Partners:
R2601_14050
Transcriptional regulator (129 aa)
         
  0.929
R2601_17279
ATPase, E1-E2 type (915 aa)
 
0.851
R2601_07328
Copper resistance protein A (579 aa)
 
 
  0.800
R2601_15672
Multicopper oxidase domain protein (457 aa)
   
 
  0.740
R2601_07363
Multicopper oxidase domain protein (424 aa)
   
 
  0.740
R2601_07098
Multicopper oxidase domain protein (420 aa)
   
 
  0.740
R2601_07053
Multicopper oxidase, putative (464 aa)
   
 
  0.740
R2601_14040
Uncharacterized protein (141 aa)
              0.621
znuC
Zinc import ATP-binding protein ZnuC ; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system (259 aa)
       
  0.613
R2601_24944
Phosphate regulon transcriptional regulatory protein PhoB (229 aa)
   
 
  0.600
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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