STRINGSTRING
R2601_14110 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14110" - OmpA domain protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14110OmpA domain protein (517 aa)    
Predicted Functional Partners:
R2601_24924
Phosphate transport system permease protein ; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane (484 aa)
   
 
  0.948
R2601_24929
Phosphate ABC transporter, permease protein (452 aa)
   
 
  0.934
R2601_14115
Translocase (334 aa)
 
          0.925
pstB
Phosphate-transporting ATPase ; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system (265 aa)
 
 
  0.921
R2601_23435
Lipoprotein, putative (168 aa)
   
          0.746
R2601_09083
Uncharacterized protein (165 aa)
   
          0.740
R2601_09078
Lipoprotein, putative (286 aa)
   
          0.739
R2601_09772
Uncharacterized protein (216 aa)
   
          0.709
R2601_12066
Cytoplasmic sensor hybrid histidine kinase (855 aa)
 
   
  0.699
R2601_12740
Sensory box histidine kinase/response regulator (626 aa)
 
   
  0.682
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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