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nusA protein (Pelagibaca bermudensis) - STRING interaction network
"nusA" - Transcription termination/antitermination protein NusA in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
nusATranscription termination/antitermination protein NusA ; Participates in both transcription termination and antitermination (542 aa)    
Predicted Functional Partners:
rimP
Ribosome maturation factor RimP ; Required for maturation of 30S ribosomal subunits (195 aa)
 
        0.980
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (822 aa)
 
 
  0.965
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1378 aa)
 
 
  0.957
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
      0.946
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1418 aa)
 
 
  0.931
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (338 aa)
 
 
  0.920
R2601_14150
Uncharacterized protein (217 aa)
   
        0.913
rpoD
Sigma-70 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (661 aa)
 
 
  0.889
rpoH
RNA polymerase sigma-32 factor (298 aa)
 
 
  0.879
trmD
tRNA [GM37] methyltransferase ; Specifically methylates guanosine-37 in various tRNAs (271 aa)
 
   
  0.823
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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