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dapE protein (Pelagibaca bermudensis) - STRING interaction network
"dapE" - N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase in Pelagibaca bermudensis
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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dapEN-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase ; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (381 aa)    
Predicted Functional Partners:
argD
Acetylornithine aminotransferase (398 aa)
   
 
  0.991
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)
       
  0.988
dapD
Tetrahydrodipicolinate N-succinyltransferase (275 aa)
 
   
  0.941
R2601_16690
Aminotransferase, classes I and II (393 aa)
 
 
  0.929
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
 
  0.919
R2601_19145
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (308 aa)
 
 
  0.912
argG
Citrulline--aspartate ligase (406 aa)
 
  0.870
ftsA
Cell division protein FtsA ; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring (443 aa)
   
     
  0.850
R2601_13449
Urea amidohydrolase subunit beta (224 aa)
     
 
  0.846
R2601_00255
FAD linked oxidase (946 aa)
   
  0.837
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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