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nudH protein (Pelagibaca bermudensis) - STRING interaction network
"nudH" - (Di)nucleoside polyphosphate hydrolase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
nudH(Di)nucleoside polyphosphate hydrolase ; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (160 aa)    
Predicted Functional Partners:
R2601_24734
Nicotinamide nucleotide repair protein ; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (536 aa)
   
  0.871
R2601_14220
Carboxyl-terminal protease family protein (448 aa)
 
   
  0.863
R2601_12990
Glutamate synthase, large subunit (1537 aa)
       
  0.840
R2601_14225
Uncharacterized protein (371 aa)
         
  0.797
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase ; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (504 aa)
   
        0.772
pyrG
UTP--ammonia ligase ; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (547 aa)
   
 
    0.667
R2601_14170
Ribonuclease R (506 aa)
   
  0.665
deoB
Phosphodeoxyribomutase ; Phosphotransfer between the C1 and C5 carbon atoms of pentose (401 aa)
       
    0.634
tig
PPIase ; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (443 aa)
 
 
  0.630
R2601_10964
Geranylgeranyl pyrophosphate synthetase (289 aa)
 
    0.614
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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