STRINGSTRING
R2601_14470 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14470" - Flagellar hook-length control protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14470Flagellar hook-length control protein (136 aa)    
Predicted Functional Partners:
R2601_14465
Basal-body rod modification protein FlgD ; Required for flagellar hook formation. May act as a scaffolding protein (224 aa)
 
          0.922
R2601_14475
Flagellar protein FlgJ, putative (67 aa)
 
     
  0.791
R2601_13529
Conserved hypoothetical protein (88 aa)
   
          0.765
R2601_18518
Possible flagellar switch protein FliM (396 aa)
   
          0.763
R2601_21987
Possible flagellar motor switch protein (FliG) (350 aa)
   
          0.735
R2601_16845
Uncharacterized protein (271 aa)
   
          0.726
R2601_21231
Uncharacterized protein (109 aa)
   
          0.723
R2601_14590
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (334 aa)
   
          0.660
R2601_22272
Uncharacterized protein (290 aa)
   
          0.636
R2601_15417
Uncharacterized protein (867 aa)
   
          0.628
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]