STRINGSTRING
R2601_14575 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14575" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14575Uncharacterized protein (513 aa)    
Predicted Functional Partners:
R2601_14565
Flagellar biosynthetic protein FliR (255 aa)
 
          0.861
R2601_15327
Uncharacterized protein (117 aa)
 
          0.790
R2601_15332
Flagellar basal body-associated protein FliL (182 aa)
 
          0.790
R2601_15342
ABC transporter, ATP-binding protein, flagellar, putative (201 aa)
 
          0.786
R2601_15322
Uncharacterized protein (221 aa)
 
          0.784
R2601_14590
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (334 aa)
 
          0.778
R2601_14405
Uncharacterized protein (203 aa)
   
          0.774
R2601_07846
Uncharacterized protein (533 aa)
   
          0.754
R2601_14550
Uncharacterized protein (171 aa)
   
          0.752
R2601_07831
Uncharacterized protein (589 aa)
   
          0.749
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]