STRINGSTRING
R2601_14590 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14590" - Flagellin in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14590Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (334 aa)    
Predicted Functional Partners:
R2601_14595
Flagellar hook-associated protein K (486 aa)
 
          0.977
R2601_14600
Flagellar hook protein FlgE (432 aa)
 
          0.956
R2601_14585
Basal body P-ring protein ; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (370 aa)
 
          0.955
R2601_14605
Chemotaxis protein MotB (277 aa)
 
          0.853
R2601_14580
Flagellar motor protein (289 aa)
 
          0.830
R2601_19270
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (432 aa)
   
   
    0.815
R2601_14485
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (429 aa)
   
   
    0.800
R2601_14575
Uncharacterized protein (513 aa)
 
          0.778
R2601_15342
ABC transporter, ATP-binding protein, flagellar, putative (201 aa)
   
          0.778
R2601_14550
Uncharacterized protein (171 aa)
 
          0.776
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]