STRINGSTRING
R2601_14645 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14645" - MltA/3D domain protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14645MltA/3D domain protein (347 aa)    
Predicted Functional Partners:
R2601_14650
Transporter, Tim44 family protein (219 aa)
 
          0.901
R2601_14640
Smr domain protein (181 aa)
              0.788
R2601_12950
Penicillin-binding protein, 1A family (727 aa)
       
 
  0.773
R2601_14655
FxsA (183 aa)
              0.752
secB
Protein-export protein SecB ; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA (169 aa)
              0.699
R2601_12995
Monofunctional biosynthetic peptidoglycan transglycosylase ; Cell wall formation (221 aa)
       
 
  0.577
R2601_11304
Possible penicillin binding protein (499 aa)
   
          0.548
R2601_17374
Ribulose-phosphate 3-epimerase (233 aa)
              0.450
R2601_10017
Predicted Orn/Lys/Arg decarboxylase (762 aa)
   
          0.432
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (13%) [HD]