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R2601_14665 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14665" - Putative DNA polymerase III, epsilon subunit and related 3'-5' exonuclease in Pelagibaca bermudensis
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
R2601_14665Putative DNA polymerase III, epsilon subunit and related 3’-5’ exonuclease (229 aa)    
Predicted Functional Partners:
R2601_14420
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
 
 
  0.989
R2601_10369
DNA-directed DNA polymerase (1174 aa)
     
  0.956
R2601_17304
DNA polymerase III subunits gamma and tau (588 aa)
     
  0.942
R2601_15447
DNA polymerase I (935 aa)
 
  0.938
dnaE2
Error-prone DNA polymerase ; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1078 aa)
   
  0.928
R2601_11669
Ribonuclease HI (130 aa)
 
 
  0.919
R2601_14680
Maf-like protein R2601_14680 (199 aa)
   
 
  0.902
coaE
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (196 aa)
   
        0.889
aroE
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (276 aa)
         
  0.889
R2601_19599
DNA polymerase III subunit delta (372 aa)
     
  0.834
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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