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coaE protein (Pelagibaca bermudensis) - STRING interaction network
"coaE" - Dephosphocoenzyme A kinase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coaEDephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (196 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (165 aa)
 
 
  0.911
aroE
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (276 aa)
         
  0.901
fpg
DNA-(apurinic or apyrimidinic site) lyase MutM ; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (283 aa)
   
  0.896
R2601_14665
Putative DNA polymerase III, epsilon subunit and related 3’-5’ exonuclease (229 aa)
   
        0.889
R2601_14680
Maf-like protein R2601_14680 (199 aa)
              0.887
acpS
4’-phosphopantetheinyl transferase AcpS ; Transfers the 4’-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (134 aa)
         
  0.787
R2601_15447
DNA polymerase I (935 aa)
   
   
  0.766
R2601_09937
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (398 aa)
 
  0.766
R2601_05593
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (343 aa)
   
  0.686
R2601_14105
DNA repair protein RadC (253 aa)
 
          0.645
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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