STRINGSTRING
R2601_14710 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14710" - Chromosome partitioning protein ParA in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
R2601_14710Chromosome partitioning protein ParA (269 aa)    
Predicted Functional Partners:
R2601_14715
Chromosome partitioning protein parB (303 aa)
 
  0.993
rsmG
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA (181 aa)
   
   
  0.905
R2601_07453
Chromosome partitioning protein, ParB (346 aa)
 
 
  0.878
R2601_23670
Cobalt chelatase, pCobT subunit (625 aa)
     
 
    0.801
R2601_23680
Cobalt chelatase, CobS small subunit (327 aa)
   
 
    0.794
gidA
Glucose-inhibited division protein A ; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (622 aa)
   
   
  0.788
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
 
 
  0.754
mnmE
tRNA modification GTPase MnmE ; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 (373 aa)
   
        0.751
R2601_25911
Tyrosine recombinase XerD (141 aa)
 
   
  0.742
R2601_11269
ParA family protein (224 aa)
   
          0.715
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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