STRINGSTRING
R2601_14775 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14775" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14775Uncharacterized protein (238 aa)    
Predicted Functional Partners:
R2601_14770
Putative IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase (298 aa)
          0.990
ilvD
Dihydroxy-acid dehydratase (609 aa)
         
    0.975
R2601_05743
Dihydroxy-acid dehydratase protein (581 aa)
         
    0.975
R2601_05298
Dihydroxy-acid dehydratase (598 aa)
         
    0.975
R2601_01718
Dihydroxy-acid dehydratase (577 aa)
         
    0.975
R2601_13234
Uncharacterized protein (183 aa)
         
    0.900
R2601_10834
2-oxoglutarate dehydrogenase complex component E2 ; The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) (512 aa)
         
    0.900
R2601_14760
Peptide-methionine (S)-S-oxide reductase ; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (215 aa)
              0.632
R2601_14780
Uncharacterized protein (137 aa)
              0.579
R2601_09772
Uncharacterized protein (216 aa)
   
          0.565
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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