STRINGSTRING
R2601_14795 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14795" - Uncharacterized protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
R2601_14795Uncharacterized protein (246 aa)    
Predicted Functional Partners:
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
              0.807
R2601_14495
Flagellin synthesis repressor protein FlbT, putative (134 aa)
   
          0.721
R2601_00620
Uncharacterized protein (337 aa)
   
          0.705
R2601_00735
Sarcosine oxidase, gamma subunit family protein (186 aa)
   
          0.698
R2601_14575
Uncharacterized protein (513 aa)
   
          0.688
R2601_05588
Uncharacterized protein (104 aa)
   
          0.658
R2601_21807
Uncharacterized protein (140 aa)
   
          0.654
R2601_15885
Uncharacterized protein (295 aa)
   
          0.640
R2601_23885
Uncharacterized protein (145 aa)
   
          0.638
R2601_27071
Lipoprotein, putative (183 aa)
   
          0.636
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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