STRINGSTRING
R2601_14815 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14815" - Hydrolase, NUDIX family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14815Hydrolase, NUDIX family protein (145 aa)    
Predicted Functional Partners:
R2601_14190
Uncharacterized protein (110 aa)
   
          0.757
R2601_14820
33 kDa chaperonin ; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (327 aa)
 
          0.743
R2601_08026
Uncharacterized protein (178 aa)
   
          0.731
R2601_18278
Uncharacterized protein (341 aa)
   
          0.727
R2601_13759
Uncharacterized protein (88 aa)
   
          0.720
R2601_21121
Putative FtsL (114 aa)
   
          0.699
R2601_26386
Uncharacterized protein (87 aa)
   
          0.685
R2601_17629
Uncharacterized protein (109 aa)
   
          0.657
R2601_12885
Uncharacterized protein (110 aa)
   
          0.653
R2601_10634
Uncharacterized protein (179 aa)
   
          0.639
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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