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R2601_14845 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14845" - ABC multidrug efflux pump, fused ATPase and inner membrane subunits in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14845ABC multidrug efflux pump, fused ATPase and inner membrane subunits (615 aa)    
Predicted Functional Partners:
R2601_14840
ABC transporter, transmembrane ATP-binding protein (614 aa)
 
       
0.869
R2601_26771
Uncharacterized protein (547 aa)
 
 
0.783
ccmA
Heme exporter protein A ; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system (204 aa)
 
 
  0.741
R2601_14850
23S rRNA (Uracil-5-)-methyltransferase rumA (407 aa)
   
        0.738
R2601_14830
PolyA polymerase family protein (363 aa)
   
   
  0.720
R2601_14835
Lysine exporter family protein (LYSE/YGGA) (194 aa)
   
        0.715
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (227 aa)
 
0.680
znuC
Zinc import ATP-binding protein ZnuC ; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system (259 aa)
 
 
 
0.662
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (329 aa)
 
   
  0.658
R2601_24340
Permease, YjgP/YjgQ family protein (364 aa)
 
 
  0.650
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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