STRINGSTRING
R2601_14890 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14890" - Glutaredoxin in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14890Glutaredoxin (85 aa)    
Predicted Functional Partners:
R2601_09215
Thioredoxin reductase (334 aa)
   
  0.822
R2601_14885
Competence protein F (241 aa)
              0.801
R2601_12990
Glutamate synthase, large subunit (1537 aa)
       
    0.778
R2601_14895
Transcriptional regulator, putative (146 aa)
              0.737
R2601_14880
Uncharacterized protein (273 aa)
              0.727
R2601_18628
Ribonucleoside-diphosphate reductase subunit beta ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (326 aa)
   
  0.694
R2601_14360
NAD(+) synthase (552 aa)
   
    0.692
R2601_22532
Glutaredoxin (120 aa)
 
 
  0.685
gshB
Glutathione synthase (311 aa)
 
     
  0.675
R2601_24789
Ribonucleotide-diphosphate reductase alpha subunit (1215 aa)
   
 
  0.635
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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