STRINGSTRING
R2601_14900 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14900" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14900Uncharacterized protein (100 aa)    
Predicted Functional Partners:
ubiG
3-demethylubiquinone 3-O-methyltransferase ; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway (250 aa)
              0.859
R2601_10414
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (350 aa)
       
    0.842
R2601_14910
Proline iminopeptidase (332 aa)
              0.653
R2601_14915
Peptide ABC transporter, periplasmic peptide-binding protein (515 aa)
              0.504
R2601_26041
Segregation and condensation protein B ; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (256 aa)
   
        0.479
R2601_06863
Uncharacterized protein (198 aa)
   
        0.479
R2601_19849
Probable riboflavin-specific deaminase (233 aa)
       
    0.472
R2601_08191
Nitrite reductase small subunit (110 aa)
   
        0.468
R2601_06388
Putative ferredoxin (113 aa)
   
        0.468
trpS
Tryptophanyl-tRNA synthetase (344 aa)
   
        0.461
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]