STRINGSTRING
R2601_14950 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14950" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14950Uncharacterized protein (976 aa)    
Predicted Functional Partners:
R2601_14945
ATP-dependent DNA helicase, UvrD/Rep family protein (1125 aa)
 
 
  0.992
R2601_14970
Uncharacterized protein (497 aa)
 
          0.950
R2601_14965
Uncharacterized protein (157 aa)
              0.933
R2601_14960
Uncharacterized protein (325 aa)
              0.933
R2601_14955
Nucleotidyltransferase family protein (226 aa)
              0.933
R2601_14940
Thioredoxin (106 aa)
              0.834
R2601_23388
Uncharacterized protein (158 aa)
   
          0.767
R2601_15070
HemY domain protein (511 aa)
   
          0.759
R2601_18563
Uncharacterized protein (86 aa)
   
          0.745
R2601_16900
Uncharacterized protein (166 aa)
   
          0.741
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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