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R2601_14990 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_14990" - Acetyltransferase, GNAT family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_14990Acetyltransferase, GNAT family protein (161 aa)    
Predicted Functional Partners:
R2601_14995
HD domain protein (188 aa)
              0.866
R2601_15000
Methyltransferase FkbM family protein (229 aa)
              0.742
R2601_08466
Uncharacterized protein (77 aa)
   
          0.705
R2601_21732
Glutathione S-transferase family protein (221 aa)
   
          0.695
R2601_10469
Uncharacterized protein (477 aa)
   
          0.650
R2601_15557
Glycosyl transferase, family 2 (413 aa)
   
          0.647
R2601_23450
Uncharacterized protein (233 aa)
   
          0.626
R2601_23435
Lipoprotein, putative (168 aa)
   
          0.616
R2601_05478
Cytochrome P450-like protein (432 aa)
   
          0.613
R2601_16420
Integral membrane protein (282 aa)
   
          0.602
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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