STRINGSTRING
R2601_15050 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15050" - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15050NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (320 aa)    
Predicted Functional Partners:
plsY
Lysophosphatidic acid synthase ; Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (205 aa)
 
   
  0.992
tsaD
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (359 aa)
   
   
  0.920
R2601_15045
YCII-related domain protein (90 aa)
              0.914
R2601_15040
Uncharacterized protein (139 aa)
              0.914
R2601_05293
Aerobic glycerol-3-phosphate dehydrogenase (531 aa)
   
  0.904
R2601_00965
Glycerol-3-phosphate dehydrogenase (502 aa)
   
  0.904
plsX
Phosphate-acyl-ACP acyltransferase ; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA (370 aa)
 
 
  0.900
R2601_22472
Acyltransferase, putative (274 aa)
   
  0.896
R2601_10869
Acyltransferase family protein (244 aa)
   
  0.896
R2601_02643
Putative glycerol-3-phosphate dehydrogenase protein (564 aa)
   
  0.884
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]