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tsaD protein (Pelagibaca bermudensis) - STRING interaction network
"tsaD" - tRNA threonylcarbamoyladenosine biosynthesis protein TsaD in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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tsaDtRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (359 aa)    
Predicted Functional Partners:
R2601_14965
Uncharacterized protein (157 aa)
 
  0.947
R2601_11209
Protease, putative (207 aa)
   
0.929
R2601_15050
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (320 aa)
   
   
  0.920
R2601_15045
YCII-related domain protein (90 aa)
              0.887
R2601_15040
Uncharacterized protein (139 aa)
              0.887
pheT
Phenylalanyl-tRNA synthetase beta subunit (798 aa)
 
   
  0.876
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (278 aa)
 
   
  0.838
R2601_15060
Uncharacterized protein (248 aa)
 
          0.807
R2601_17634
Elongation factor P (187 aa)
 
   
  0.796
R2601_15447
DNA polymerase I (935 aa)
 
   
  0.787
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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