STRINGSTRING
R2601_15287 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15287" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15287Uncharacterized protein (276 aa)    
Predicted Functional Partners:
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
   
 
  0.844
R2601_08646
Inositol monophosphatase family protein (260 aa)
   
          0.770
pgi
Phosphohexose isomerase (527 aa)
   
 
  0.750
R2601_15297
ABC efflux transporter, ATPase subunit (210 aa)
              0.647
R2601_15292
ABC transporter, permease protein (841 aa)
              0.647
R2601_17394
Fructose-bisphosphate aldolase I (359 aa)
       
    0.617
R2601_00920
Fructose-bisphosphate aldolase (344 aa)
       
    0.617
R2601_08821
Imidazole glycerol phosphate synthase subunit HisH (187 aa)
   
 
  0.606
R2601_15562
3’(2’),5’-bisphosphate nucleotidase (256 aa)
   
 
0.594
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
        0.589
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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