STRINGSTRING
R2601_15327 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15327" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15327Uncharacterized protein (117 aa)    
Predicted Functional Partners:
R2601_15322
Uncharacterized protein (221 aa)
 
          0.968
R2601_15332
Flagellar basal body-associated protein FliL (182 aa)
 
          0.964
R2601_15337
Flagellar M-ring protein ; The M ring may be actively involved in energy transduction (546 aa)
 
          0.905
R2601_15342
ABC transporter, ATP-binding protein, flagellar, putative (201 aa)
 
          0.901
R2601_15347
Flagellar motor switch protein FliN (95 aa)
 
          0.829
R2601_14575
Uncharacterized protein (513 aa)
 
          0.790
R2601_14590
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (334 aa)
   
          0.776
R2601_14550
Uncharacterized protein (171 aa)
   
          0.774
R2601_14475
Flagellar protein FlgJ, putative (67 aa)
   
          0.765
R2601_14595
Flagellar hook-associated protein K (486 aa)
   
          0.746
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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