STRINGSTRING
R2601_15377 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15377" - Prephenate dehydrogenase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15377Prephenate dehydrogenase (302 aa)    
Predicted Functional Partners:
hisC
Imidazole acetol-phosphate transaminase (361 aa)
   
 
  0.979
aroA
5-enolpyruvylshikimate-3-phosphate synthase ; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (447 aa)
   
  0.975
R2601_10489
Prephenate dehydratase (277 aa)
 
 
  0.952
R2601_16380
Chorismate mutase (101 aa)
 
  0.922
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (192 aa)
 
 
  0.907
R2601_12408
Chorismate mutase family protein (98 aa)
   
  0.903
R2601_18950
Aspartate aminotransferase (400 aa)
       
  0.893
R2601_15382
Uncharacterized protein (309 aa)
              0.887
R2601_17674
Histidinol-phosphate aminotransferase (372 aa)
   
 
  0.850
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
       
  0.844
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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