STRINGSTRING
R2601_15427 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15427" - Putative acetyltransferase protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15427Putative acetyltransferase protein (166 aa)    
Predicted Functional Partners:
R2601_15422
Ion transport protein (257 aa)
              0.859
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
       
  0.818
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
 
    0.816
R2601_15432
Uncharacterized protein (236 aa)
              0.807
lysA
Diaminopimelate decarboxylase ; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (421 aa)
   
 
    0.696
R2601_14750
NADP-dependent malic enzyme (751 aa)
       
  0.665
R2601_10082
Malic enzyme (759 aa)
       
  0.665
R2601_11204
Putative acetyltransferase (139 aa)
   
  0.657
R2601_15417
Uncharacterized protein (867 aa)
              0.564
R2601_04738
Phosphoglucomutase/phosphomannomutase (457 aa)
 
 
  0.530
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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