STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein (236 aa)
Predicted Functional Partners:
Putative acetyltransferase protein (166 aa)
Ion transport protein (257 aa)
Uncharacterized protein (867 aa)
Diaminopimelate decarboxylase ; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (421 aa)
Uracil-DNA glycosylase (264 aa)
Uracil-DNA glycosylase, putative (198 aa)
Putative uracil-DNA glycosylase (316 aa)
Putative uracil DNA glycosylase protein (499 aa)
4’-phosphopantetheinyl transferase AcpS ; Transfers the 4’-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (134 aa)
Ribonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (227 aa)
Your Current Organism:
NCBI taxonomy Id: 314265 Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601