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R2601_15452 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15452" - Peptidase S8 and S53, subtilisin, kexin, sedolisin in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15452Peptidase S8 and S53, subtilisin, kexin, sedolisin (408 aa)    
Predicted Functional Partners:
asd
Aspartate-beta-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (340 aa)
       
      0.663
R2601_05458
Uncharacterized protein (445 aa)
   
 
      0.631
R2601_15457
Kinase, pfkB family protein (337 aa)
   
   
  0.607
R2601_04713
Uncharacterized protein (949 aa)
 
 
  0.601
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (214 aa)
              0.598
R2601_13749
Nitroreductase family protein (192 aa)
       
      0.491
smc
Chromosome partition protein Smc ; Required for chromosome condensation and partitioning (1151 aa)
 
      0.490
R2601_15447
DNA polymerase I (935 aa)
     
   
  0.485
R2601_17379
CbbX protein (310 aa)
   
 
  0.481
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
   
  0.476
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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