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R2601_15457 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15457" - Kinase, pfkB family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
R2601_15457Kinase, pfkB family protein (337 aa)    
Predicted Functional Partners:
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (214 aa)
              0.887
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
   
  0.877
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
 
  0.856
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
   
  0.850
R2601_04743
Mannose-6-phosphate isomerase, type II (477 aa)
       
  0.821
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (431 aa)
   
  0.817
ahcY
S-adenosyl-L-homocysteine hydrolase ; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (461 aa)
 
 
  0.806
glmS
L-glutamine--D-fructose-6-phosphate amidotransferase ; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (605 aa)
       
    0.786
R2601_20576
Alkaline phosphatase (2191 aa)
   
 
  0.775
R2601_10027
Fructose-1,6-bisphosphatase (321 aa)
       
  0.757
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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