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R2601_15522 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15522" - PTS IIA-like nitrogen-regulatory protein PtsN in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15522PTS IIA-like nitrogen-regulatory protein PtsN (154 aa)    
Predicted Functional Partners:
R2601_16860
Phosphocarrier protein HPr (92 aa)
 
   
  0.919
R2601_16875
Hpr serine kinase/phosphatase domain protein (142 aa)
 
     
  0.827
R2601_26236
Trk system potassium uptake protein TrkA (458 aa)
       
 
  0.814
R2601_15240
Phosphofructokinase (317 aa)
 
 
  0.804
R2601_16865
PTS system IIA component, Man family protein (132 aa)
 
 
  0.796
R2601_15517
Ribosomal subunit interface protein, putative (187 aa)
   
        0.796
R2601_17908
Phosphoenolpyruvate-protein phosphotransferase (744 aa)
   
     
  0.792
R2601_13344
Transcriptional regulator, DeoR family protein (257 aa)
 
     
  0.699
R2601_15507
Uncharacterized protein (165 aa)
 
        0.698
R2601_13404
Uncharacterized protein (279 aa)
 
     
  0.691
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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