STRINGSTRING
R2601_15542 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15542" - Glycosyltransferase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15542Glycosyltransferase (400 aa)    
Predicted Functional Partners:
R2601_15557
Glycosyl transferase, family 2 (413 aa)
 
          0.879
R2601_15547
UDP-glucose 4-epimerase (327 aa)
              0.863
R2601_15552
UDP-glucose pyrophosphorylase (297 aa)
              0.814
R2601_18333
Capsular polysaccharide export protein KpsS (430 aa)
 
          0.784
R2601_04743
Mannose-6-phosphate isomerase, type II (477 aa)
 
          0.691
R2601_11524
Capsular polysaccharide export ATP-binding protein (219 aa)
 
          0.678
R2601_18323
Capsular polysaccharide export protein KpsC (709 aa)
 
          0.671
R2601_15532
Core-2/I-branching enzyme family protein (566 aa)
 
          0.641
R2601_15537
Uncharacterized protein (309 aa)
 
          0.641
R2601_15527
Uncharacterized protein (475 aa)
 
          0.630
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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