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R2601_15552 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15552" - UDP-glucose pyrophosphorylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15552UDP-glucose pyrophosphorylase (297 aa)    
Predicted Functional Partners:
R2601_15547
UDP-glucose 4-epimerase (327 aa)
 
  0.988
R2601_24584
Phosphoglucomutase (544 aa)
       
  0.981
glmM
Phosphoglucosamine mutase ; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (447 aa)
  0.944
R2601_04743
Mannose-6-phosphate isomerase, type II (477 aa)
 
 
  0.922
R2601_14345
Oxidoreductase, Gfo/Idh/MocA family protein (699 aa)
       
  0.919
R2601_06103
Putative NAD dependent epimerase/dehydratase (318 aa)
 
   
  0.906
R2601_13689
Nucleotide sugar epimerase/dehydratase (628 aa)
       
  0.894
R2601_04738
Phosphoglucomutase/phosphomannomutase (457 aa)
   
  0.858
R2601_17299
UDP-glucose 4-epimerase (301 aa)
   
   
    0.829
rpsL
30S ribosomal protein S12 ; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (123 aa)
     
   
  0.824
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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