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R2601_15562 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15562" - 3'(2'),5'-bisphosphate nucleotidase in Pelagibaca bermudensis
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_155623’(2’),5’-bisphosphate nucleotidase (256 aa)    
Predicted Functional Partners:
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
 
 
  0.962
R2601_22362
Phosphoadenylyl-sulfate reductase (thioredoxin) ; Reduction of activated sulfate into sulfite (263 aa)
   
  0.923
R2601_20981
Inositol monophosphatase family protein (269 aa)
   
 
  0.873
R2601_15557
Glycosyl transferase, family 2 (413 aa)
              0.866
R2601_15567
ABC transporter, permease protein (276 aa)
              0.653
R2601_15552
UDP-glucose pyrophosphorylase (297 aa)
              0.624
R2601_18970
Inositol-1-monophosphatase, putative (263 aa)
   
 
0.605
R2601_15287
Uncharacterized protein (276 aa)
   
 
0.594
R2601_08646
Inositol monophosphatase family protein (260 aa)
   
 
0.591
R2601_15547
UDP-glucose 4-epimerase (327 aa)
   
        0.567
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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