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R2601_15732 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15732" - Putative ABC transporter, periplasmic substrate-binding protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15732Putative ABC transporter, periplasmic substrate-binding protein (579 aa)    
Predicted Functional Partners:
R2601_15722
ABC transporter, inner membrane subunit (377 aa)
 
  0.998
R2601_15727
ABC transporter, ATPase subunit (263 aa)
 
  0.997
R2601_15737
Uncharacterized protein (201 aa)
 
    0.984
R2601_24235
Membrane protein (260 aa)
 
  0.955
R2601_24225
ABC transporter, ATP-binding protein (255 aa)
   
  0.922
R2601_18433
Uncharacterized protein (149 aa)
   
   
    0.811
R2601_11951
Toluene tolerance family protein (200 aa)
       
    0.775
R2601_15507
Uncharacterized protein (165 aa)
 
          0.514
R2601_21281
Histidinol dehydrogenase ; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (437 aa)
   
        0.495
R2601_09365
Histidinol dehydrogenase ; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (433 aa)
   
        0.495
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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