STRINGSTRING
R2601_15920 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_15920" - Integrase, catalytic domain in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_15920Integrase, catalytic domain (88 aa)    
Predicted Functional Partners:
R2601_15855
Insertion element ISR1 hypothetical 10 kDa protein A3 (87 aa)
   
  0.918
R2601_15925
Insertion element ISR1 hypothetical 10 kDa protein A3 (87 aa)
   
  0.886
R2601_15915
No annotation available (341 aa)
              0.632
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
       
    0.581
R2601_07428
Uncharacterized protein (122 aa)
 
   
  0.497
R2601_06983
No annotation available (122 aa)
 
   
  0.497
groL
Protein Cpn60 ; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (547 aa)
     
      0.488
R2601_24919
Phosphate ABC transporter, periplasmic phosphate-binding protein (346 aa)
     
 
  0.461
R2601_14110
OmpA domain protein (517 aa)
     
 
  0.461
R2601_21697
Salicylate hydroxylase (392 aa)
       
    0.417
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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