STRINGSTRING
R2601_16100 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16100" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16100Uncharacterized protein (503 aa)    
Predicted Functional Partners:
R2601_16105
Uncharacterized protein (169 aa)
   
  0.994
R2601_16070
Probable ClpA/B-type chaperone (889 aa)
 
 
  0.967
R2601_16110
Uncharacterized protein (351 aa)
 
   
  0.954
R2601_22062
Probable ClpA/B-type protease (914 aa)
 
 
  0.944
R2601_16080
Uncharacterized protein (624 aa)
 
   
  0.938
R2601_16075
Uncharacterized protein (339 aa)
 
   
  0.934
R2601_16090
Uncharacterized protein (278 aa)
 
        0.920
R2601_22072
Uncharacterized protein (179 aa)
   
  0.918
R2601_16055
Uncharacterized protein (708 aa)
 
     
  0.913
R2601_16030
Uncharacterized protein (444 aa)
 
   
  0.911
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]