STRINGSTRING
R2601_16330 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16330" - Sulfate permease in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16330Sulfate permease (590 aa)    
Predicted Functional Partners:
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
   
   
  0.767
R2601_13669
Carbonate dehydratase ; Reversible hydration of carbon dioxide (215 aa)
 
 
  0.746
acpP
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
     
      0.730
R2601_16335
Uncharacterized protein (557 aa)
 
   
  0.673
R2601_18538
Metallo-beta-lactamase family protein (288 aa)
 
        0.591
R2601_12810
Beta-lactamase-like protein (291 aa)
   
        0.462
R2601_18528
YeeE/YedE family protein (145 aa)
 
          0.416
R2601_18523
Uncharacterized protein (141 aa)
 
          0.405
R2601_18533
YeeE/YedE family protein (141 aa)
 
          0.405
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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