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R2601_16675 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16675" - Acetyltransferase, GNAT family protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16675Acetyltransferase, GNAT family protein (242 aa)    
Predicted Functional Partners:
R2601_16670
Alkyl hydroperoxide reductase AhpD ; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity (189 aa)
              0.897
R2601_16680
Molybdenum cofactor biosynthesis domain protein (240 aa)
              0.887
R2601_16665
OmpA domain protein (310 aa)
              0.887
R2601_18278
Uncharacterized protein (341 aa)
   
          0.770
R2601_24884
Uncharacterized protein (235 aa)
   
          0.743
R2601_16570
Uncharacterized protein (216 aa)
   
          0.743
R2601_27161
Uncharacterized protein (236 aa)
   
          0.741
R2601_12006
Uncharacterized protein (507 aa)
   
          0.738
R2601_08026
Uncharacterized protein (178 aa)
   
          0.736
R2601_25456
Uncharacterized protein (173 aa)
   
          0.709
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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