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R2601_16720 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16720" - L-threonine aldolase, low-specificity, putative in Pelagibaca bermudensis
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_16720L-threonine aldolase, low-specificity, putative (359 aa)    
Predicted Functional Partners:
R2601_13249
FolC bifunctional protein (425 aa)
       
    0.981
R2601_01365
Serine--glyoxylate transaminase, putative (395 aa)
   
 
  0.979
R2601_11439
Phosphoserine phosphatase (289 aa)
         
    0.977
glyA
Serine hydroxymethyltransferase ; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (431 aa)
     
  0.915
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (948 aa)
       
  0.895
R2601_16730
Riboflavin biosynthesis protein (310 aa)
              0.887
R2601_16725
UPF0260 protein R2601_16725 (156 aa)
              0.887
R2601_18668
Putative sarcosine dehydrogenase protein (853 aa)
   
  0.886
R2601_18690
Sarcosine oxidase alpha subunit (996 aa)
     
    0.875
R2601_10189
Sarcosine oxidase, alpha subunit family protein (1012 aa)
     
    0.875
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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