STRINGSTRING
R2601_16740 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16740" - Conserved protein containing sulfotransfer domain in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16740Conserved protein containing sulfotransfer domain (488 aa)    
Predicted Functional Partners:
R2601_16735
Alanine racemase domain protein (217 aa)
              0.862
R2601_16745
Putative porin (351 aa)
 
          0.784
R2601_16750
Uncharacterized protein (173 aa)
 
          0.541
R2601_02848
Tryptophan halogenase, putative (439 aa)
   
          0.496
R2601_07846
Uncharacterized protein (533 aa)
   
          0.476
R2601_16730
Riboflavin biosynthesis protein (310 aa)
              0.442
R2601_16725
UPF0260 protein R2601_16725 (156 aa)
              0.442
R2601_16720
L-threonine aldolase, low-specificity, putative (359 aa)
              0.442
R2601_02588
Transcriptional regulator (334 aa)
   
          0.438
R2601_21321
Putative calcium-binding EF-hand domain protein (222 aa)
   
          0.426
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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