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R2601_16835 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16835" - Transcriptional regulator/arsenate reductase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16835Transcriptional regulator/arsenate reductase (264 aa)    
Predicted Functional Partners:
R2601_04698
Exopolysaccharide polymerization/transport protein (763 aa)
   
 
  0.987
R2601_16830
Glyceraldehyde-3-phosphate dehydrogenase (332 aa)
   
   
  0.903
R2601_15125
Uncharacterized protein (490 aa)
   
 
  0.816
R2601_02623
NADPH-dependent FMN reductase (237 aa)
 
   
  0.802
R2601_15317
Thioredoxin (146 aa)
 
 
  0.793
R2601_02618
Arsenite efflux pump, ACR3 family protein (348 aa)
 
     
  0.783
R2601_16825
Uncharacterized protein (423 aa)
   
        0.763
R2601_14940
Thioredoxin (106 aa)
   
 
  0.760
R2601_12680
Arsenate reductase (112 aa)
   
 
  0.759
R2601_15215
Exopolysaccharide biosynthesis domain protein (380 aa)
   
 
  0.738
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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