STRINGSTRING
R2601_16840 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16840" - Uncharacterized protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16840Uncharacterized protein (463 aa)    
Predicted Functional Partners:
ackA
Acetokinase ; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (396 aa)
 
  0.997
R2601_08371
Dihydrolipoamide acetyltransferase (461 aa)
   
 
  0.956
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
       
  0.900
R2601_17988
Enoyl-CoA hydratase (634 aa)
       
  0.900
R2601_20194
Uncharacterized protein (592 aa)
 
   
  0.858
R2601_16820
Putative poly-beta-hydroxyalkanoate synthase (579 aa)
 
     
  0.857
R2601_02538
3-hydroxybutyryl-CoA dehydrogenase (473 aa)
       
  0.841
acsA
Acyl-activating enzyme ; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (656 aa)
   
 
  0.839
R2601_10072
Possible acyl-CoA sythetase (633 aa)
   
 
  0.839
R2601_21717
Acetyl-coenzyme A synthetase (524 aa)
   
 
  0.838
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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