STRINGSTRING
R2601_16855 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16855" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16855Uncharacterized protein (293 aa)    
Predicted Functional Partners:
R2601_16860
Phosphocarrier protein HPr (92 aa)
              0.780
R2601_16880
Sensor histidine kinase ChvG (576 aa)
 
          0.683
R2601_16870
Nucleotide-binding protein R2601_16870 ; Displays ATPase and GTPase activities (308 aa)
              0.679
R2601_16865
PTS system IIA component, Man family protein (132 aa)
              0.677
R2601_16885
DNA-binding response regulator ChvI (233 aa)
 
          0.645
R2601_16875
Hpr serine kinase/phosphatase domain protein (142 aa)
              0.618
R2601_21176
Uncharacterized protein (84 aa)
   
          0.539
R2601_11354
Uncharacterized protein (273 aa)
   
        0.525
R2601_14950
Uncharacterized protein (976 aa)
              0.510
R2601_12216
Uncharacterized protein (234 aa)
   
          0.492
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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