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R2601_16870 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_16870" - Nucleotide-binding protein R2601_16870 in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_16870Nucleotide-binding protein R2601_16870 ; Displays ATPase and GTPase activities (308 aa)    
Predicted Functional Partners:
R2601_16875
Hpr serine kinase/phosphatase domain protein (142 aa)
 
        0.972
R2601_16865
PTS system IIA component, Man family protein (132 aa)
              0.887
R2601_16885
DNA-binding response regulator ChvI (233 aa)
              0.868
R2601_16880
Sensor histidine kinase ChvG (576 aa)
              0.868
R2601_16860
Phosphocarrier protein HPr (92 aa)
   
   
  0.805
R2601_15517
Ribosomal subunit interface protein, putative (187 aa)
 
        0.709
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
 
        0.682
R2601_16855
Uncharacterized protein (293 aa)
              0.679
nrdR
Transcriptional repressor NrdR ; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes (156 aa)
 
          0.607
murA
UDP-N-acetylglucosamine enolpyruvyl transferase ; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (423 aa)
 
        0.570
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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