STRINGSTRING
R2601_17087 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17087" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17087Uncharacterized protein (495 aa)    
Predicted Functional Partners:
R2601_10869
Acyltransferase family protein (244 aa)
 
  0.872
R2601_22472
Acyltransferase, putative (274 aa)
   
  0.841
R2601_17092
Putative lipid II flippase MurJ ; Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (515 aa)
              0.829
R2601_25091
Phosphatidate cytidylyltransferase (262 aa)
   
 
  0.817
psd
Phosphatidylserine decarboxylase proenzyme ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (226 aa)
   
  0.795
R2601_12141
CDP-diglyceride-choline O-phosphatidyltransferase ; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP (231 aa)
     
  0.722
R2601_09817
CDP-diacylglycerol--serine O-phosphatidyltransferase (267 aa)
     
  0.700
R2601_26241
Lipoprotein, putative (202 aa)
   
          0.653
R2601_09777
Lipoprotein, putative (226 aa)
   
          0.648
R2601_25291
Uncharacterized protein (261 aa)
   
          0.643
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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