STRINGSTRING
R2601_17097 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17097" - Xylulokinase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17097Xylulokinase (483 aa)    
Predicted Functional Partners:
R2601_01015
L-idonate 5-dehydrogenase (349 aa)
 
 
  0.944
R2601_02008
Xylitol dehydrogenase (350 aa)
 
 
  0.937
R2601_26546
Mannitol dehydrogenase (497 aa)
 
  0.894
R2601_00680
Sorbitol dehydrogenase (351 aa)
 
 
  0.875
R2601_00985
D-mannonate oxidoreductase (486 aa)
 
  0.874
R2601_21442
L-iditol 2-dehydrogenase (342 aa)
 
 
  0.874
R2601_22242
Putative Zn-dependent dehydrogenase (334 aa)
 
 
  0.867
tdh
L-threonine 3-dehydrogenase (345 aa)
   
 
  0.848
R2601_17374
Ribulose-phosphate 3-epimerase (233 aa)
 
   
  0.841
R2601_03723
Zinc-containing alcohol dehydrogenase superfamily protein (104 aa)
   
 
  0.837
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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