STRINGSTRING
R2601_17217 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17217" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17217Uncharacterized protein (246 aa)    
Predicted Functional Partners:
yidC
Membrane protein YidC ; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (611 aa)
   
        0.890
engB
Probable GTP-binding protein EngB ; Necessary for normal cell division and for the maintenance of normal septation (217 aa)
              0.887
argB
NAG kinase (297 aa)
   
        0.590
R2601_17227
Diguanylate cyclase, putative (515 aa)
   
        0.583
R2601_17202
Uncharacterized protein (227 aa)
   
        0.569
R2601_17197
Uncharacterized protein (166 aa)
              0.569
ttcA
tRNA 2-thiocytidine biosynthesis protein TtcA ; Required for the thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32) (328 aa)
   
        0.483
R2601_16745
Putative porin (351 aa)
   
          0.443
R2601_20194
Uncharacterized protein (592 aa)
   
 
    0.433
R2601_08878
2-hydroxychromene-2-carboxylate isomerase (201 aa)
   
        0.414
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]